BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C08SP1|AL425668
(747 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1714 1478 0.0
>3x_Contig1714
Length = 18873
Score = 1478 bits (745), Expect = 0.0
Identities = 746/747 (99%)
Strand = Plus / Minus
Query: 1 atattcttcggtggtgaagtcgtaatcccatggaacaaccaacaattcaacaccacgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5561 atattcttcggtggtgaagtcgtaatcccatggaacaaccaacaattcaacaccacgctt 5502
Query: 61 gacgaaacaacggatttggttgtacttcatacccacatcaacggcaacaattcgtaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5501 gacgaaacaacggatttggttgtacttcatacccacatcaacggcaacaattcgtaaagt 5442
Query: 121 ttttccgtcaggaccttgaacaagatcgatgtctgggtggtttggaacgaaaagcttagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5441 ttttccgtcaggaccttgaacaagatcgatgtctgggtggtttggaacgaaaagcttagg 5382
Query: 181 agcctttagggaaacctttgccactaaattatcaacatttggatcaacccattctggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5381 agcctttagggaaacctttgccactaaattatcaacatttggatcaacccattctggagt 5322
Query: 241 ttcgaagtaagacatccattcagcagagttggcatcctcgaaagaggtcccgggcttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5321 ttcgaagtaagacatccattcagcagagttggcatcctcgaaagaggtcccgggcttttg 5262
Query: 301 tagagcgaatctacccaacatggaaccagcttctcttaaatgtttggtcaagcttctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5261 tagagcgaatctacccaacatggaaccagcttctcttaaatgtttggtcaagcttctgct 5202
Query: 361 atcaataccgtagacagctggaacgttgctctctttcaaccaagtacctaaagaagattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5201 atcaataccgtagacagctggaacgttgctctctttcaaccaagtacctaaagaagattg 5142
Query: 421 agctaaccagtgagaatattcttcggtgtaatgagcaatgactaaaccagcaacatgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5141 agctaaccagtgagaatattcttcggtgtaatgagcaatgactaaaccagcaacatgaat 5082
Query: 481 tctgttggattcaaaataacgtggtaatccttccacgtattcatccattaatttacggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5081 tctgttggattcaaaataacgtggtaatccttccacgtattcatccattaatttacggtc 5022
Query: 541 agggacaccgtagttaccaaccaatgggaaagtgataactaawatctgaccctcataaga 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5021 agggacaccgtagttaccaaccaatgggaaagtgataactaaaatctgaccctcataaga 4962
Query: 601 aggatctgtgatggactctgggtaaccgaccataccagtttggaaaaccaattcaccggc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4961 aggatctgtgatggactctgggtaaccgaccataccagtttggaaaaccaattcaccggc 4902
Query: 661 tgcagtggtttcggcaccaaaggagtaaccttgtaaagtagttccatcctttaattccaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4901 tgcagtggtttcggcaccaaaggagtaaccttgtaaagtagttccatcctttaattccaa 4842
Query: 721 ggtaatcatacgatcaccagtagactc 747
|||||||||||||||||||||||||||
Sbjct: 4841 ggtaatcatacgatcaccagtagactc 4815
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4925
Number of Sequences: 1807
Number of extensions: 4925
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 747
length of database: 10,358,551
effective HSP length: 16
effective length of query: 731
effective length of database: 10,329,639
effective search space: 7550966109
effective search space used: 7550966109
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)